Cluster: MGYG000003613_CGC22
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003613
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003613_121 | MGYG000003613_121_2 | 292 | 3300 | + | GH2 |
| CAZyme | MGYG000003613_121 | MGYG000003613_121_3 | 3321 | 5681 | + | GH95 |
| CAZyme | MGYG000003613_121 | MGYG000003613_121_4 | 5895 | 7745 | + | GH20 |
| TC | MGYG000003613_121 | MGYG000003613_121_5 | 7774 | 9552 | + | 3.A.1.106.2 |
| TC | MGYG000003613_121 | MGYG000003613_121_6 | 9577 | 11325 | - | 8.A.59.2.1 |
| TF | MGYG000003613_121 | MGYG000003613_121_7 | 11355 | 12104 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000003613_121 | MGYG000003613_121_8 | 12567 | 13535 | + | 3.A.1.1.10 |
| TC | MGYG000003613_121 | MGYG000003613_121_9 | 13570 | 14508 | + | 3.A.1.1.10 |
| STP | MGYG000003613_121 | MGYG000003613_121_10 | 14558 | 16192 | + | SBP_bac_1 |
| pfam | MGYG000003613_121 | MGYG000003613_121_11 | 16263 | 18182 | + | DUF4838 |
| CAZyme | MGYG000003613_121 | MGYG000003613_121_12 | 18333 | 20636 | + | GH136 |
Gene ID: MGYG000003613_121_2
Type: CAZyme
Location: 292 - 3300 (+)
Type: CAZyme
Location: 292 - 3300 (+)
Gene ID: MGYG000003613_121_3
Type: CAZyme
Location: 3321 - 5681 (+)
Type: CAZyme
Location: 3321 - 5681 (+)
Gene ID: MGYG000003613_121_4
Type: CAZyme
Location: 5895 - 7745 (+)
Type: CAZyme
Location: 5895 - 7745 (+)
Gene ID: MGYG000003613_121_5
Type: TC
Location: 7774 - 9552 (+)
Type: TC
Location: 7774 - 9552 (+)
Gene ID: MGYG000003613_121_6
Type: TC
Location: 9577 - 11325 (-)
Type: TC
Location: 9577 - 11325 (-)
Gene ID: MGYG000003613_121_7
Type: TF
Location: 11355 - 12104 (-)
Type: TF
Location: 11355 - 12104 (-)
Gene ID: MGYG000003613_121_8
Type: TC
Location: 12567 - 13535 (+)
Type: TC
Location: 12567 - 13535 (+)
Gene ID: MGYG000003613_121_9
Type: TC
Location: 13570 - 14508 (+)
Type: TC
Location: 13570 - 14508 (+)
Gene ID: MGYG000003613_121_10
Type: STP
Location: 14558 - 16192 (+)
Type: STP
Location: 14558 - 16192 (+)
Gene ID: MGYG000003613_121_11
Type: pfam
Location: 16263 - 18182 (+)
Type: pfam
Location: 16263 - 18182 (+)
Gene ID: MGYG000003613_121_12
Type: CAZyme
Location: 18333 - 20636 (+)
Type: CAZyme
Location: 18333 - 20636 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp004558185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.