Cluster: MGYG000003613_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003613
- CGC Family ID: CGCFAM_00049
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003613_115 | MGYG000003613_115_26 | 19933 | 21315 | + | 1.A.26.1.3 |
| NULL(UNKNOWN) | MGYG000003613_115 | MGYG000003613_115_27 | 21381 | 21608 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000003613_115 | MGYG000003613_115_28 | 21802 | 22995 | - | Aminotran_1_2 |
| TC | MGYG000003613_115 | MGYG000003613_115_29 | 23038 | 24036 | - | 9.B.18.2.1 |
| CAZyme | MGYG000003613_115 | MGYG000003613_115_30 | 24159 | 25157 | - | GT2 |
| CAZyme | MGYG000003613_115 | MGYG000003613_115_31 | 25192 | 26358 | - | GT4 |
Gene ID: MGYG000003613_115_26
Type: TC
Location: 19933 - 21315 (+)
Type: TC
Location: 19933 - 21315 (+)
Gene ID: MGYG000003613_115_27
Type:
Location: 21381 - 21608 (-)
Type:
Location: 21381 - 21608 (-)
Gene ID: MGYG000003613_115_28
Type: STP
Location: 21802 - 22995 (-)
Type: STP
Location: 21802 - 22995 (-)
Gene ID: MGYG000003613_115_29
Type: TC
Location: 23038 - 24036 (-)
Type: TC
Location: 23038 - 24036 (-)
Gene ID: MGYG000003613_115_30
Type: CAZyme
Location: 24159 - 25157 (-)
Type: CAZyme
Location: 24159 - 25157 (-)
Gene ID: MGYG000003613_115_31
Type: CAZyme
Location: 25192 - 26358 (-)
Type: CAZyme
Location: 25192 - 26358 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp004558185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.