Cluster: MGYG000003613_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003613
- CGC Family ID: CGCFAM_00242
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003613_93 | MGYG000003613_93_3 | 1438 | 2322 | - | 3.A.1.1.18 |
| TC | MGYG000003613_93 | MGYG000003613_93_4 | 2337 | 3251 | - | 3.A.1.1.20 |
| STP | MGYG000003613_93 | MGYG000003613_93_5 | 3342 | 4763 | - | SBP_bac_1 |
| TF | MGYG000003613_93 | MGYG000003613_93_6 | 5208 | 6083 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000003613_93 | MGYG000003613_93_7 | 6110 | 6772 | - | GH136 |
Gene ID: MGYG000003613_93_3
Type: TC
Location: 1438 - 2322 (-)
Type: TC
Location: 1438 - 2322 (-)
Gene ID: MGYG000003613_93_4
Type: TC
Location: 2337 - 3251 (-)
Type: TC
Location: 2337 - 3251 (-)
Gene ID: MGYG000003613_93_5
Type: STP
Location: 3342 - 4763 (-)
Type: STP
Location: 3342 - 4763 (-)
Gene ID: MGYG000003613_93_6
Type: TF
Location: 5208 - 6083 (+)
Type: TF
Location: 5208 - 6083 (+)
Gene ID: MGYG000003613_93_7
Type: CAZyme
Location: 6110 - 6772 (-)
Type: CAZyme
Location: 6110 - 6772 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp004558185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.