Cluster: MGYG000003613_CGC16
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003613
- CGC Family ID: CGCFAM_03180
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003613_91 | MGYG000003613_91_5 | 8908 | 10047 | - | CE9 |
| STP | MGYG000003613_91 | MGYG000003613_91_6 | 10220 | 11398 | + | SIS |
| TC | MGYG000003613_91 | MGYG000003613_91_7 | 11411 | 11845 | + | 4.A.6.1.14 |
| pfam | MGYG000003613_91 | MGYG000003613_91_8 | 11904 | 12206 | + | YajC |
| TF | MGYG000003613_91 | MGYG000003613_91_9 | 12280 | 13479 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000003613_91 | MGYG000003613_91_10 | 13749 | 14225 | + | 4.A.6.1.4 |
| TC | MGYG000003613_91 | MGYG000003613_91_11 | 14256 | 15068 | + | 4.A.6.1.4 |
| TC | MGYG000003613_91 | MGYG000003613_91_12 | 15058 | 15885 | + | 4.A.6.1.4 |
| pfam | MGYG000003613_91 | MGYG000003613_91_13 | 15891 | 16559 | + | Hydrolase | HAD_2 |
| pfam | MGYG000003613_91 | MGYG000003613_91_14 | 16658 | 17521 | - | Cons_hypoth95 | Methyltrans_SAM |
| TC | MGYG000003613_91 | MGYG000003613_91_15 | 17552 | 19330 | - | 1.B.52.2.1 |
Gene ID: MGYG000003613_91_5
Type: CAZyme
Location: 8908 - 10047 (-)
Type: CAZyme
Location: 8908 - 10047 (-)
Gene ID: MGYG000003613_91_6
Type: STP
Location: 10220 - 11398 (+)
Type: STP
Location: 10220 - 11398 (+)
Gene ID: MGYG000003613_91_7
Type: TC
Location: 11411 - 11845 (+)
Type: TC
Location: 11411 - 11845 (+)
Gene ID: MGYG000003613_91_8
Type: pfam
Location: 11904 - 12206 (+)
Type: pfam
Location: 11904 - 12206 (+)
Gene ID: MGYG000003613_91_9
Type: TF
Location: 12280 - 13479 (-)
Type: TF
Location: 12280 - 13479 (-)
Gene ID: MGYG000003613_91_10
Type: TC
Location: 13749 - 14225 (+)
Type: TC
Location: 13749 - 14225 (+)
Gene ID: MGYG000003613_91_11
Type: TC
Location: 14256 - 15068 (+)
Type: TC
Location: 14256 - 15068 (+)
Gene ID: MGYG000003613_91_12
Type: TC
Location: 15058 - 15885 (+)
Type: TC
Location: 15058 - 15885 (+)
Gene ID: MGYG000003613_91_13
Type: pfam
Location: 15891 - 16559 (+)
Type: pfam
Location: 15891 - 16559 (+)
Gene ID: MGYG000003613_91_14
Type: pfam
Location: 16658 - 17521 (-)
Type: pfam
Location: 16658 - 17521 (-)
Gene ID: MGYG000003613_91_15
Type: TC
Location: 17552 - 19330 (-)
Type: TC
Location: 17552 - 19330 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp004558185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.