Cluster: MGYG000003613_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003613
- CGC Family ID: CGCFAM_00228
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003613_60 | MGYG000003613_60_1 | 798 | 2636 | - | 9.B.33.1.2 |
| TF | MGYG000003613_60 | MGYG000003613_60_2 | 2633 | 3706 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000003613_60 | MGYG000003613_60_3 | 3943 | 4899 | + | 3.A.1.1.29 |
| TC | MGYG000003613_60 | MGYG000003613_60_4 | 4886 | 5845 | + | 3.A.1.1.29 |
| STP | MGYG000003613_60 | MGYG000003613_60_5 | 5904 | 7460 | + | SBP_bac_1 |
| CAZyme | MGYG000003613_60 | MGYG000003613_60_6 | 7543 | 10611 | + | GH2 |
Gene ID: MGYG000003613_60_1
Type: TC
Location: 798 - 2636 (-)
Type: TC
Location: 798 - 2636 (-)
Gene ID: MGYG000003613_60_2
Type: TF
Location: 2633 - 3706 (-)
Type: TF
Location: 2633 - 3706 (-)
Gene ID: MGYG000003613_60_3
Type: TC
Location: 3943 - 4899 (+)
Type: TC
Location: 3943 - 4899 (+)
Gene ID: MGYG000003613_60_4
Type: TC
Location: 4886 - 5845 (+)
Type: TC
Location: 4886 - 5845 (+)
Gene ID: MGYG000003613_60_5
Type: STP
Location: 5904 - 7460 (+)
Type: STP
Location: 5904 - 7460 (+)
Gene ID: MGYG000003613_60_6
Type: CAZyme
Location: 7543 - 10611 (+)
Type: CAZyme
Location: 7543 - 10611 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
SFDP01
Species
SFDP01 sp004558185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.