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Cluster: MGYG000003613_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003613_58 MGYG000003613_58_21 18864 19919 + 1.B.52.2.1
pfam MGYG000003613_58 MGYG000003613_58_22 19992 20807 - S6PP | S6PP | Hydrolase_3
pfam MGYG000003613_58 MGYG000003613_58_23 20804 21706 - PHP
TC MGYG000003613_58 MGYG000003613_58_24 21708 23339 - 3.A.1.121.4
STP MGYG000003613_58 MGYG000003613_58_25 23674 24588 + GGDEF
CAZyme MGYG000003613_58 MGYG000003613_58_26 24711 26147 + GH29
TF MGYG000003613_58 MGYG000003613_58_27 26338 28254 + HTH_AraC | HTH_AraC
STP MGYG000003613_58 MGYG000003613_58_28 28528 30198 + SBP_bac_1
TC MGYG000003613_58 MGYG000003613_58_29 30222 31148 + 3.A.1.1.10
TC MGYG000003613_58 MGYG000003613_58_30 31173 32099 + 3.A.1.1.10
Gene ID: MGYG000003613_58_21
Type: TC
Location: 18864 - 19919 (+)
Gene ID: MGYG000003613_58_22
Type: pfam
Location: 19992 - 20807 (-)
Gene ID: MGYG000003613_58_23
Type: pfam
Location: 20804 - 21706 (-)
Gene ID: MGYG000003613_58_24
Type: TC
Location: 21708 - 23339 (-)
Gene ID: MGYG000003613_58_25
Type: STP
Location: 23674 - 24588 (+)
Gene ID: MGYG000003613_58_26
Type: CAZyme
Location: 24711 - 26147 (+)
Gene ID: MGYG000003613_58_27
Type: TF
Location: 26338 - 28254 (+)
Gene ID: MGYG000003613_58_28
Type: STP
Location: 28528 - 30198 (+)
Gene ID: MGYG000003613_58_29
Type: TC
Location: 30222 - 31148 (+)
Gene ID: MGYG000003613_58_30
Type: TC
Location: 31173 - 32099 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
SFDP01
→
Species
SFDP01 sp004558185

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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