Cluster: MGYG000003612_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003612
- CGC Family ID: CGCFAM_06272
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003612_17 | MGYG000003612_17_28 | 31449 | 32453 | - | GH73 |
| TF | MGYG000003612_17 | MGYG000003612_17_29 | 32720 | 33766 | + | LacI |
| pfam | MGYG000003612_17 | MGYG000003612_17_30 | 34098 | 35396 | + | AAA_14 | DUF4143 |
| TC | MGYG000003612_17 | MGYG000003612_17_31 | 35515 | 36795 | - | 2.A.56.1.4 |
| pfam | MGYG000003612_17 | MGYG000003612_17_32 | 36806 | 37309 | - | DctQ |
| TC | MGYG000003612_17 | MGYG000003612_17_33 | 37371 | 38366 | - | 2.A.56.1.8 |
Gene ID: MGYG000003612_17_28
Type: CAZyme
Location: 31449 - 32453 (-)
Type: CAZyme
Location: 31449 - 32453 (-)
Gene ID: MGYG000003612_17_29
Type: TF
Location: 32720 - 33766 (+)
Type: TF
Location: 32720 - 33766 (+)
Gene ID: MGYG000003612_17_30
Type: pfam
Location: 34098 - 35396 (+)
Type: pfam
Location: 34098 - 35396 (+)
Gene ID: MGYG000003612_17_31
Type: TC
Location: 35515 - 36795 (-)
Type: TC
Location: 35515 - 36795 (-)
Gene ID: MGYG000003612_17_32
Type: pfam
Location: 36806 - 37309 (-)
Type: pfam
Location: 36806 - 37309 (-)
Gene ID: MGYG000003612_17_33
Type: TC
Location: 37371 - 38366 (-)
Type: TC
Location: 37371 - 38366 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio sp900770725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.