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Cluster: MGYG000003612_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003612_7 MGYG000003612_7_53 57804 58544 + 3.A.6.1.1
NULL(UNKNOWN) MGYG000003612_7 MGYG000003612_7_54 58541 59170 + NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000003612_7 MGYG000003612_7_55 59146 59772 + FliH | T3SS_SCTL
TC MGYG000003612_7 MGYG000003612_7_56 59762 61078 + 3.A.6.1.1
STP MGYG000003612_7 MGYG000003612_7_57 61081 62976 - SpoIIE
CAZyme MGYG000003612_7 MGYG000003612_7_58 62973 63644 - GH23
pfam MGYG000003612_7 MGYG000003612_7_59 63631 64071 - HATPase_c_2
STP MGYG000003612_7 MGYG000003612_7_60 64075 64416 - STAS
TC MGYG000003612_7 MGYG000003612_7_61 64647 64910 + 3.A.6.1.1
TC MGYG000003612_7 MGYG000003612_7_62 64913 65752 + 3.A.6.1.1
pfam MGYG000003612_7 MGYG000003612_7_63 65762 67975 - MFS_1 | MFS_1
pfam MGYG000003612_7 MGYG000003612_7_64 68143 69165 + FliMN_C
TC MGYG000003612_7 MGYG000003612_7_65 69173 69844 + 3.A.6.1.1
Gene ID: MGYG000003612_7_53
Type: TC
Location: 57804 - 58544 (+)
Gene ID: MGYG000003612_7_54
Type:
Location: 58541 - 59170 (+)
Gene ID: MGYG000003612_7_55
Type: pfam
Location: 59146 - 59772 (+)
Gene ID: MGYG000003612_7_56
Type: TC
Location: 59762 - 61078 (+)
Gene ID: MGYG000003612_7_57
Type: STP
Location: 61081 - 62976 (-)
Gene ID: MGYG000003612_7_58
Type: CAZyme
Location: 62973 - 63644 (-)
Gene ID: MGYG000003612_7_59
Type: pfam
Location: 63631 - 64071 (-)
Gene ID: MGYG000003612_7_60
Type: STP
Location: 64075 - 64416 (-)
Gene ID: MGYG000003612_7_61
Type: TC
Location: 64647 - 64910 (+)
Gene ID: MGYG000003612_7_62
Type: TC
Location: 64913 - 65752 (+)
Gene ID: MGYG000003612_7_63
Type: pfam
Location: 65762 - 67975 (-)
Gene ID: MGYG000003612_7_64
Type: pfam
Location: 68143 - 69165 (+)
Gene ID: MGYG000003612_7_65
Type: TC
Location: 69173 - 69844 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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