Cluster: MGYG000003605.1_CGC6
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003605.1
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003605.1_78 | MGYG000003605.1_78_19 | 18009 | 19877 | - | GH13_46 |
| CAZyme | MGYG000003605.1_78 | MGYG000003605.1_78_20 | 19884 | 21212 | - | GH13 |
| CAZyme | MGYG000003605.1_78 | MGYG000003605.1_78_21 | 21230 | 22624 | - | GH13 |
| CAZyme | MGYG000003605.1_78 | MGYG000003605.1_78_22 | 22642 | 24720 | - | GH13_45 |
| CAZyme | MGYG000003605.1_78 | MGYG000003605.1_78_23 | 24908 | 26143 | - | GH53 |
| pfam | MGYG000003605.1_78 | MGYG000003605.1_78_24 | 26270 | 28768 | - | CBM26 |
| TC | MGYG000003605.1_78 | MGYG000003605.1_78_25 | 28802 | 30370 | - | 8.A.46.1.1 |
| TC | MGYG000003605.1_78 | MGYG000003605.1_78_26 | 30394 | 33495 | - | 1.B.14.6.1 |
| TC | MGYG000003605.1_78 | MGYG000003605.1_78_27 | 33568 | 34941 | - | 2.A.2.6.2 |
| pfam | MGYG000003605.1_78 | MGYG000003605.1_78_28 | 35251 | 36651 | + | His_kinase |
| TF | MGYG000003605.1_78 | MGYG000003605.1_78_29 | 36648 | 37424 | + | LytTR |
| TC | MGYG000003605.1_78 | MGYG000003605.1_78_30 | 37570 | 38370 | + | 1.B.18.3.7 |
| TC | MGYG000003605.1_78 | MGYG000003605.1_78_31 | 38415 | 40799 | + | 8.A.3.1.2 |
| NULL(UNKNOWN) | MGYG000003605.1_78 | MGYG000003605.1_78_32 | 40815 | 41201 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003605.1_78 | MGYG000003605.1_78_33 | 41324 | 42061 | - | GH23 |
Gene ID: MGYG000003605.1_78_19
Type: CAZyme
Location: 18009 - 19877 (-)
Type: CAZyme
Location: 18009 - 19877 (-)
Gene ID: MGYG000003605.1_78_20
Type: CAZyme
Location: 19884 - 21212 (-)
Type: CAZyme
Location: 19884 - 21212 (-)
Gene ID: MGYG000003605.1_78_21
Type: CAZyme
Location: 21230 - 22624 (-)
Type: CAZyme
Location: 21230 - 22624 (-)
Gene ID: MGYG000003605.1_78_22
Type: CAZyme
Location: 22642 - 24720 (-)
Type: CAZyme
Location: 22642 - 24720 (-)
Gene ID: MGYG000003605.1_78_23
Type: CAZyme
Location: 24908 - 26143 (-)
Type: CAZyme
Location: 24908 - 26143 (-)
Gene ID: MGYG000003605.1_78_24
Type: pfam
Location: 26270 - 28768 (-)
Type: pfam
Location: 26270 - 28768 (-)
Gene ID: MGYG000003605.1_78_25
Type: TC
Location: 28802 - 30370 (-)
Type: TC
Location: 28802 - 30370 (-)
Gene ID: MGYG000003605.1_78_26
Type: TC
Location: 30394 - 33495 (-)
Type: TC
Location: 30394 - 33495 (-)
Gene ID: MGYG000003605.1_78_27
Type: TC
Location: 33568 - 34941 (-)
Type: TC
Location: 33568 - 34941 (-)
Gene ID: MGYG000003605.1_78_28
Type: pfam
Location: 35251 - 36651 (+)
Type: pfam
Location: 35251 - 36651 (+)
Gene ID: MGYG000003605.1_78_29
Type: TF
Location: 36648 - 37424 (+)
Type: TF
Location: 36648 - 37424 (+)
Gene ID: MGYG000003605.1_78_30
Type: TC
Location: 37570 - 38370 (+)
Type: TC
Location: 37570 - 38370 (+)
Gene ID: MGYG000003605.1_78_31
Type: TC
Location: 38415 - 40799 (+)
Type: TC
Location: 38415 - 40799 (+)
Gene ID: MGYG000003605.1_78_32
Type:
Location: 40815 - 41201 (+)
Type:
Location: 40815 - 41201 (+)
Gene ID: MGYG000003605.1_78_33
Type: CAZyme
Location: 41324 - 42061 (-)
Type: CAZyme
Location: 41324 - 42061 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900770635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.