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Cluster: MGYG000003593_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003593_302 MGYG000003593_302_8 4658 5983 + GH4
TC MGYG000003593_302 MGYG000003593_302_9 6028 7563 + 4.A.1.1.3
TF MGYG000003593_302 MGYG000003593_302_10 7620 8381 - HTH_6
TF MGYG000003593_302 MGYG000003593_302_11 8365 9168 - HTH_6
TC MGYG000003593_302 MGYG000003593_302_12 9341 9829 + 4.A.1.2.2
pfam MGYG000003593_302 MGYG000003593_302_13 9972 11093 + Radical_SAM | SPASM
TC MGYG000003593_302 MGYG000003593_302_14 11298 12776 + 3.A.1.103.6
STP MGYG000003593_302 MGYG000003593_302_15 12802 14160 + AraC_binding
pfam MGYG000003593_302 MGYG000003593_302_16 14166 15863 + PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme MGYG000003593_302 MGYG000003593_302_17 15874 19791 + GT27
CAZyme MGYG000003593_302 MGYG000003593_302_18 19791 20573 + GT2
Gene ID: MGYG000003593_302_8
Type: CAZyme
Location: 4658 - 5983 (+)
Gene ID: MGYG000003593_302_9
Type: TC
Location: 6028 - 7563 (+)
Gene ID: MGYG000003593_302_10
Type: TF
Location: 7620 - 8381 (-)
Gene ID: MGYG000003593_302_11
Type: TF
Location: 8365 - 9168 (-)
Gene ID: MGYG000003593_302_12
Type: TC
Location: 9341 - 9829 (+)
Gene ID: MGYG000003593_302_13
Type: pfam
Location: 9972 - 11093 (+)
Gene ID: MGYG000003593_302_14
Type: TC
Location: 11298 - 12776 (+)
Gene ID: MGYG000003593_302_15
Type: STP
Location: 12802 - 14160 (+)
Gene ID: MGYG000003593_302_16
Type: pfam
Location: 14166 - 15863 (+)
Gene ID: MGYG000003593_302_17
Type: CAZyme
Location: 15874 - 19791 (+)
Gene ID: MGYG000003593_302_18
Type: CAZyme
Location: 19791 - 20573 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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