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Cluster: MGYG000003593_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003593_254 MGYG000003593_254_7 8020 9045 + 2.A.56.1.5
TC MGYG000003593_254 MGYG000003593_254_8 9058 9522 + 2.A.56.1.5
TC MGYG000003593_254 MGYG000003593_254_9 9526 10830 + 2.A.56.1.5
TF MGYG000003593_254 MGYG000003593_254_10 10865 11785 - HTH_AraC | HTH_AraC
CAZyme MGYG000003593_254 MGYG000003593_254_11 11944 13071 + GH105
CAZyme MGYG000003593_254 MGYG000003593_254_12 13125 14336 + CE12
pfam MGYG000003593_254 MGYG000003593_254_13 14438 15439 + Choline_bind_1 | Choline_bind_1 | Choline_bind_2 | Choline_bind_3
CAZyme MGYG000003593_254 MGYG000003593_254_14 15630 16640 + GH179
Gene ID: MGYG000003593_254_7
Type: TC
Location: 8020 - 9045 (+)
Gene ID: MGYG000003593_254_8
Type: TC
Location: 9058 - 9522 (+)
Gene ID: MGYG000003593_254_9
Type: TC
Location: 9526 - 10830 (+)
Gene ID: MGYG000003593_254_10
Type: TF
Location: 10865 - 11785 (-)
Gene ID: MGYG000003593_254_11
Type: CAZyme
Location: 11944 - 13071 (+)
Gene ID: MGYG000003593_254_12
Type: CAZyme
Location: 13125 - 14336 (+)
Gene ID: MGYG000003593_254_13
Type: pfam
Location: 14438 - 15439 (+)
Gene ID: MGYG000003593_254_14
Type: CAZyme
Location: 15630 - 16640 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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