Cluster: MGYG000003592_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003592
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003592_26 | MGYG000003592_26_19 | 15480 | 16667 | + | CE4 |
| pfam | MGYG000003592_26 | MGYG000003592_26_20 | 16793 | 17230 | + | DUF3015 |
| TF | MGYG000003592_26 | MGYG000003592_26_21 | 17375 | 17830 | - | FUR |
| TC | MGYG000003592_26 | MGYG000003592_26_22 | 18052 | 19368 | + | 1.B.52.2.1 |
| CAZyme | MGYG000003592_26 | MGYG000003592_26_23 | 19386 | 21422 | + | GT51 |
Gene ID: MGYG000003592_26_19
Type: CAZyme
Location: 15480 - 16667 (+)
Type: CAZyme
Location: 15480 - 16667 (+)
Gene ID: MGYG000003592_26_20
Type: pfam
Location: 16793 - 17230 (+)
Type: pfam
Location: 16793 - 17230 (+)
Gene ID: MGYG000003592_26_21
Type: TF
Location: 17375 - 17830 (-)
Type: TF
Location: 17375 - 17830 (-)
Gene ID: MGYG000003592_26_22
Type: TC
Location: 18052 - 19368 (+)
Type: TC
Location: 18052 - 19368 (+)
Gene ID: MGYG000003592_26_23
Type: CAZyme
Location: 19386 - 21422 (+)
Type: CAZyme
Location: 19386 - 21422 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_F
Species
Helicobacter_F sp002287135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.