Cluster: MGYG000003592_CGC8
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003592
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003592_22 | MGYG000003592_22_20 | 18319 | 20466 | + | GT2 | GT4 |
| NULL(UNKNOWN) | MGYG000003592_22 | MGYG000003592_22_21 | 20470 | 22209 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000003592_22 | MGYG000003592_22_22 | 22239 | 22790 | - | A31.UPW |
| TC | MGYG000003592_22 | MGYG000003592_22_23 | 22795 | 23541 | - | 3.D.7.2.2 |
| TC | MGYG000003592_22 | MGYG000003592_22_24 | 23554 | 25281 | - | 3.D.7.2.2 |
| TC | MGYG000003592_22 | MGYG000003592_22_25 | 25297 | 26454 | - | 3.D.7.2.2 |
| TC | MGYG000003592_22 | MGYG000003592_22_26 | 26741 | 28324 | + | 2.A.20.2.9 |
| TC | MGYG000003592_22 | MGYG000003592_22_27 | 28383 | 29717 | + | 9.A.40.2.2 |
Gene ID: MGYG000003592_22_20
Type: CAZyme
Location: 18319 - 20466 (+)
Type: CAZyme
Location: 18319 - 20466 (+)
Gene ID: MGYG000003592_22_21
Type:
Location: 20470 - 22209 (-)
Type:
Location: 20470 - 22209 (-)
Gene ID: MGYG000003592_22_22
Type: peptidase
Location: 22239 - 22790 (-)
Type: peptidase
Location: 22239 - 22790 (-)
Gene ID: MGYG000003592_22_23
Type: TC
Location: 22795 - 23541 (-)
Type: TC
Location: 22795 - 23541 (-)
Gene ID: MGYG000003592_22_24
Type: TC
Location: 23554 - 25281 (-)
Type: TC
Location: 23554 - 25281 (-)
Gene ID: MGYG000003592_22_25
Type: TC
Location: 25297 - 26454 (-)
Type: TC
Location: 25297 - 26454 (-)
Gene ID: MGYG000003592_22_26
Type: TC
Location: 26741 - 28324 (+)
Type: TC
Location: 26741 - 28324 (+)
Gene ID: MGYG000003592_22_27
Type: TC
Location: 28383 - 29717 (+)
Type: TC
Location: 28383 - 29717 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_F
Species
Helicobacter_F sp002287135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.