Cluster: MGYG000003592_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003592
- CGC Family ID: CGCFAM_00664
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003592_12 | MGYG000003592_12_12 | 12562 | 13344 | + | CE4 |
| TF | MGYG000003592_12 | MGYG000003592_12_13 | 13436 | 14116 | + | Trans_reg_C |
| pfam | MGYG000003592_12 | MGYG000003592_12_14 | 14401 | 15144 | + | adh_short | KR | adh_short_C2 |
| TC | MGYG000003592_12 | MGYG000003592_12_15 | 15236 | 15469 | + | 3.D.1.6.4 |
Gene ID: MGYG000003592_12_12
Type: CAZyme
Location: 12562 - 13344 (+)
Type: CAZyme
Location: 12562 - 13344 (+)
Gene ID: MGYG000003592_12_13
Type: TF
Location: 13436 - 14116 (+)
Type: TF
Location: 13436 - 14116 (+)
Gene ID: MGYG000003592_12_14
Type: pfam
Location: 14401 - 15144 (+)
Type: pfam
Location: 14401 - 15144 (+)
Gene ID: MGYG000003592_12_15
Type: TC
Location: 15236 - 15469 (+)
Type: TC
Location: 15236 - 15469 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_F
Species
Helicobacter_F sp002287135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.