Cluster: MGYG000003592_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003592
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003592_6 | MGYG000003592_6_58 | 42929 | 44005 | + | GT9 |
| pfam | MGYG000003592_6 | MGYG000003592_6_59 | 43999 | 44925 | + | Lip_A_acyltrans |
| TC | MGYG000003592_6 | MGYG000003592_6_60 | 44922 | 46022 | + | 3.A.1.27.1 |
| TC | MGYG000003592_6 | MGYG000003592_6_61 | 46023 | 46775 | + | 3.A.1.27.1 |
| pfam | MGYG000003592_6 | MGYG000003592_6_62 | 46772 | 47275 | + | PMSR |
| TC | MGYG000003592_6 | MGYG000003592_6_63 | 47377 | 48420 | + | 5.B.3.1.1 |
Gene ID: MGYG000003592_6_58
Type: CAZyme
Location: 42929 - 44005 (+)
Type: CAZyme
Location: 42929 - 44005 (+)
Gene ID: MGYG000003592_6_59
Type: pfam
Location: 43999 - 44925 (+)
Type: pfam
Location: 43999 - 44925 (+)
Gene ID: MGYG000003592_6_60
Type: TC
Location: 44922 - 46022 (+)
Type: TC
Location: 44922 - 46022 (+)
Gene ID: MGYG000003592_6_61
Type: TC
Location: 46023 - 46775 (+)
Type: TC
Location: 46023 - 46775 (+)
Gene ID: MGYG000003592_6_62
Type: pfam
Location: 46772 - 47275 (+)
Type: pfam
Location: 46772 - 47275 (+)
Gene ID: MGYG000003592_6_63
Type: TC
Location: 47377 - 48420 (+)
Type: TC
Location: 47377 - 48420 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_F
Species
Helicobacter_F sp002287135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.