Cluster: MGYG000003575_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003575
- CGC Family ID: CGCFAM_01391
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003575_136 | MGYG000003575_136_27 | 24244 | 25500 | - | 8.A.59.4.1 |
| pfam | MGYG000003575_136 | MGYG000003575_136_28 | 25586 | 26422 | - | Methyltr_RsmB-F |
| CAZyme | MGYG000003575_136 | MGYG000003575_136_29 | 26428 | 27681 | - | GH3 |
| TC | MGYG000003575_136 | MGYG000003575_136_30 | 27725 | 29764 | - | 1.B.52.2.2 |
Gene ID: MGYG000003575_136_27
Type: TC
Location: 24244 - 25500 (-)
Type: TC
Location: 24244 - 25500 (-)
Gene ID: MGYG000003575_136_28
Type: pfam
Location: 25586 - 26422 (-)
Type: pfam
Location: 25586 - 26422 (-)
Gene ID: MGYG000003575_136_29
Type: CAZyme
Location: 26428 - 27681 (-)
Type: CAZyme
Location: 26428 - 27681 (-)
Gene ID: MGYG000003575_136_30
Type: TC
Location: 27725 - 29764 (-)
Type: TC
Location: 27725 - 29764 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900770075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.