Cluster: MGYG000003575_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003575
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003575_99 | MGYG000003575_99_2 | 1178 | 2872 | - | CE12 |
| CAZyme | MGYG000003575_99 | MGYG000003575_99_3 | 3012 | 5177 | - | CE12 |
| TF | MGYG000003575_99 | MGYG000003575_99_4 | 5504 | 7696 | + | HTH_AraC |
| pfam | MGYG000003575_99 | MGYG000003575_99_5 | 7981 | 9459 | - | KARI_C | KARI_C | 2-Hacid_dh_C | KARI_N |
| TC | MGYG000003575_99 | MGYG000003575_99_6 | 10095 | 11546 | - | 2.A.66.1.13 |
Gene ID: MGYG000003575_99_2
Type: CAZyme
Location: 1178 - 2872 (-)
Type: CAZyme
Location: 1178 - 2872 (-)
Gene ID: MGYG000003575_99_3
Type: CAZyme
Location: 3012 - 5177 (-)
Type: CAZyme
Location: 3012 - 5177 (-)
Gene ID: MGYG000003575_99_4
Type: TF
Location: 5504 - 7696 (+)
Type: TF
Location: 5504 - 7696 (+)
Gene ID: MGYG000003575_99_5
Type: pfam
Location: 7981 - 9459 (-)
Type: pfam
Location: 7981 - 9459 (-)
Gene ID: MGYG000003575_99_6
Type: TC
Location: 10095 - 11546 (-)
Type: TC
Location: 10095 - 11546 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900770075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.