Cluster: MGYG000003575_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003575
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003575_72 | MGYG000003575_72_9 | 8845 | 10422 | + | CE12 |
| pfam | MGYG000003575_72 | MGYG000003575_72_10 | 10656 | 11339 | - | CDP-OH_P_transf |
| TC | MGYG000003575_72 | MGYG000003575_72_11 | 11663 | 12292 | + | 9.B.27.2.8 |
| pfam | MGYG000003575_72 | MGYG000003575_72_12 | 12298 | 13218 | + | VCA0040-like |
| CAZyme | MGYG000003575_72 | MGYG000003575_72_13 | 13187 | 14062 | - | GT8 |
| pfam | MGYG000003575_72 | MGYG000003575_72_14 | 14059 | 14847 | - | Acyltransferase |
| pfam | MGYG000003575_72 | MGYG000003575_72_15 | 14850 | 15719 | - | Acyltransferase |
| CAZyme | MGYG000003575_72 | MGYG000003575_72_16 | 15792 | 16715 | - | GT8 |
Gene ID: MGYG000003575_72_9
Type: CAZyme
Location: 8845 - 10422 (+)
Type: CAZyme
Location: 8845 - 10422 (+)
Gene ID: MGYG000003575_72_10
Type: pfam
Location: 10656 - 11339 (-)
Type: pfam
Location: 10656 - 11339 (-)
Gene ID: MGYG000003575_72_11
Type: TC
Location: 11663 - 12292 (+)
Type: TC
Location: 11663 - 12292 (+)
Gene ID: MGYG000003575_72_12
Type: pfam
Location: 12298 - 13218 (+)
Type: pfam
Location: 12298 - 13218 (+)
Gene ID: MGYG000003575_72_13
Type: CAZyme
Location: 13187 - 14062 (-)
Type: CAZyme
Location: 13187 - 14062 (-)
Gene ID: MGYG000003575_72_14
Type: pfam
Location: 14059 - 14847 (-)
Type: pfam
Location: 14059 - 14847 (-)
Gene ID: MGYG000003575_72_15
Type: pfam
Location: 14850 - 15719 (-)
Type: pfam
Location: 14850 - 15719 (-)
Gene ID: MGYG000003575_72_16
Type: CAZyme
Location: 15792 - 16715 (-)
Type: CAZyme
Location: 15792 - 16715 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900770075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.