Cluster: MGYG000003575_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003575
- CGC Family ID: CGCFAM_03199
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003575_56 | MGYG000003575_56_10 | 9851 | 10618 | - | GH23 |
| NULL(UNKNOWN) | MGYG000003575_56 | MGYG000003575_56_11 | 10737 | 11168 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003575_56 | MGYG000003575_56_12 | 11302 | 11748 | - | 4.A.2.1.4 |
| TC | MGYG000003575_56 | MGYG000003575_56_13 | 12096 | 13916 | + | 1.B.52.2.1 |
Gene ID: MGYG000003575_56_10
Type: CAZyme
Location: 9851 - 10618 (-)
Type: CAZyme
Location: 9851 - 10618 (-)
Gene ID: MGYG000003575_56_11
Type:
Location: 10737 - 11168 (-)
Type:
Location: 10737 - 11168 (-)
Gene ID: MGYG000003575_56_12
Type: TC
Location: 11302 - 11748 (-)
Type: TC
Location: 11302 - 11748 (-)
Gene ID: MGYG000003575_56_13
Type: TC
Location: 12096 - 13916 (+)
Type: TC
Location: 12096 - 13916 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900770075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.