Cluster: MGYG000003575_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003575
- CGC Family ID: CGCFAM_08956
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003575_257 | MGYG000003575_257_1 | 324 | 2786 | - | GT35 |
| CAZyme | MGYG000003575_257 | MGYG000003575_257_2 | 2996 | 5122 | - | GH13_11 |
| TF | MGYG000003575_257 | MGYG000003575_257_3 | 5179 | 6255 | - | HTH_11 |
| TC | MGYG000003575_257 | MGYG000003575_257_4 | 6264 | 7376 | - | 9.B.34.1.2 |
Gene ID: MGYG000003575_257_1
Type: CAZyme
Location: 324 - 2786 (-)
Type: CAZyme
Location: 324 - 2786 (-)
Gene ID: MGYG000003575_257_2
Type: CAZyme
Location: 2996 - 5122 (-)
Type: CAZyme
Location: 2996 - 5122 (-)
Gene ID: MGYG000003575_257_3
Type: TF
Location: 5179 - 6255 (-)
Type: TF
Location: 5179 - 6255 (-)
Gene ID: MGYG000003575_257_4
Type: TC
Location: 6264 - 7376 (-)
Type: TC
Location: 6264 - 7376 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900770075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.