Cluster: MGYG000003575_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003575
- CGC Family ID: CGCFAM_10966
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003575_190 | MGYG000003575_190_3 | 3169 | 5217 | - | 1.I.1.1.3 |
| pfam | MGYG000003575_190 | MGYG000003575_190_4 | 5547 | 6215 | + | RadC |
| pfam | MGYG000003575_190 | MGYG000003575_190_5 | 6326 | 8008 | + | PEGA | FlgD_ig |
| TC | MGYG000003575_190 | MGYG000003575_190_6 | 8031 | 9320 | + | 9.B.160.1.10 |
| pfam | MGYG000003575_190 | MGYG000003575_190_7 | 9343 | 11532 | + | Lipase_3 |
| CAZyme | MGYG000003575_190 | MGYG000003575_190_8 | 11546 | 12733 | + | GT104 |
Gene ID: MGYG000003575_190_3
Type: TC
Location: 3169 - 5217 (-)
Type: TC
Location: 3169 - 5217 (-)
Gene ID: MGYG000003575_190_4
Type: pfam
Location: 5547 - 6215 (+)
Type: pfam
Location: 5547 - 6215 (+)
Gene ID: MGYG000003575_190_5
Type: pfam
Location: 6326 - 8008 (+)
Type: pfam
Location: 6326 - 8008 (+)
Gene ID: MGYG000003575_190_6
Type: TC
Location: 8031 - 9320 (+)
Type: TC
Location: 8031 - 9320 (+)
Gene ID: MGYG000003575_190_7
Type: pfam
Location: 9343 - 11532 (+)
Type: pfam
Location: 9343 - 11532 (+)
Gene ID: MGYG000003575_190_8
Type: CAZyme
Location: 11546 - 12733 (+)
Type: CAZyme
Location: 11546 - 12733 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900770075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.