Cluster: MGYG000003570_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003570
- CGC Family ID: CGCFAM_08140
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003570_64 | MGYG000003570_64_23 | 26401 | 27534 | + | GT28 |
| pfam | MGYG000003570_64 | MGYG000003570_64_24 | 27535 | 28707 | - | ThiI | THUMP | QueC | ThiI_fer |
| pfam | MGYG000003570_64 | MGYG000003570_64_25 | 28960 | 30486 | + | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| TC | MGYG000003570_64 | MGYG000003570_64_26 | 30477 | 31733 | - | 9.A.40.2.4 |
Gene ID: MGYG000003570_64_23
Type: CAZyme
Location: 26401 - 27534 (+)
Type: CAZyme
Location: 26401 - 27534 (+)
Gene ID: MGYG000003570_64_24
Type: pfam
Location: 27535 - 28707 (-)
Type: pfam
Location: 27535 - 28707 (-)
Gene ID: MGYG000003570_64_25
Type: pfam
Location: 28960 - 30486 (+)
Type: pfam
Location: 28960 - 30486 (+)
Gene ID: MGYG000003570_64_26
Type: TC
Location: 30477 - 31733 (-)
Type: TC
Location: 30477 - 31733 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.