Cluster: MGYG000003570_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003570
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003570_236 | MGYG000003570_236_2 | 1771 | 3522 | - | GH13_36 |
| TC | MGYG000003570_236 | MGYG000003570_236_3 | 3633 | 4736 | - | 3.A.1.1.6 |
| TC | MGYG000003570_236 | MGYG000003570_236_4 | 4736 | 7156 | - | 3.A.1.1.6 |
| TC | MGYG000003570_236 | MGYG000003570_236_5 | 7253 | 8431 | - | 3.A.1.1.16 |
| NULL(UNKNOWN) | MGYG000003570_236 | MGYG000003570_236_6 | 8869 | 9294 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000003570_236 | MGYG000003570_236_7 | 9563 | 10594 | + | Pribosyltran |
| TC | MGYG000003570_236 | MGYG000003570_236_8 | 10703 | 12043 | + | 2.A.40.1.4 |
Gene ID: MGYG000003570_236_2
Type: CAZyme
Location: 1771 - 3522 (-)
Type: CAZyme
Location: 1771 - 3522 (-)
Gene ID: MGYG000003570_236_3
Type: TC
Location: 3633 - 4736 (-)
Type: TC
Location: 3633 - 4736 (-)
Gene ID: MGYG000003570_236_4
Type: TC
Location: 4736 - 7156 (-)
Type: TC
Location: 4736 - 7156 (-)
Gene ID: MGYG000003570_236_5
Type: TC
Location: 7253 - 8431 (-)
Type: TC
Location: 7253 - 8431 (-)
Gene ID: MGYG000003570_236_6
Type:
Location: 8869 - 9294 (-)
Type:
Location: 8869 - 9294 (-)
Gene ID: MGYG000003570_236_7
Type: STP
Location: 9563 - 10594 (+)
Type: STP
Location: 9563 - 10594 (+)
Gene ID: MGYG000003570_236_8
Type: TC
Location: 10703 - 12043 (+)
Type: TC
Location: 10703 - 12043 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.