Cluster: MGYG000003570_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003570
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003570_224 | MGYG000003570_224_18 | 16456 | 18318 | - | 1.B.52.2.1 |
| CAZyme | MGYG000003570_224 | MGYG000003570_224_19 | 18404 | 20812 | - | GH2 |
| pfam | MGYG000003570_224 | MGYG000003570_224_20 | 20939 | 21346 | + | PEGA |
| NULL(UNKNOWN) | MGYG000003570_224 | MGYG000003570_224_21 | 21390 | 21602 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003570_224 | MGYG000003570_224_22 | 21892 | 23124 | + | 9.B.160.1.10 |
Gene ID: MGYG000003570_224_18
Type: TC
Location: 16456 - 18318 (-)
Type: TC
Location: 16456 - 18318 (-)
Gene ID: MGYG000003570_224_19
Type: CAZyme
Location: 18404 - 20812 (-)
Type: CAZyme
Location: 18404 - 20812 (-)
Gene ID: MGYG000003570_224_20
Type: pfam
Location: 20939 - 21346 (+)
Type: pfam
Location: 20939 - 21346 (+)
Gene ID: MGYG000003570_224_21
Type:
Location: 21390 - 21602 (+)
Type:
Location: 21390 - 21602 (+)
Gene ID: MGYG000003570_224_22
Type: TC
Location: 21892 - 23124 (+)
Type: TC
Location: 21892 - 23124 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.