Cluster: MGYG000003570_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003570
- CGC Family ID: CGCFAM_00006
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003570_184 | MGYG000003570_184_9 | 6827 | 8020 | - | GT2 |
| pfam | MGYG000003570_184 | MGYG000003570_184_10 | 8030 | 8926 | - | Methyltransf_21 |
| pfam | MGYG000003570_184 | MGYG000003570_184_11 | 8971 | 10392 | - | Hexapep | Glyco_transf_8 | Hexapep_2 |
| TC | MGYG000003570_184 | MGYG000003570_184_12 | 10396 | 11673 | - | 3.A.1.103.5 |
Gene ID: MGYG000003570_184_9
Type: CAZyme
Location: 6827 - 8020 (-)
Type: CAZyme
Location: 6827 - 8020 (-)
Gene ID: MGYG000003570_184_10
Type: pfam
Location: 8030 - 8926 (-)
Type: pfam
Location: 8030 - 8926 (-)
Gene ID: MGYG000003570_184_11
Type: pfam
Location: 8971 - 10392 (-)
Type: pfam
Location: 8971 - 10392 (-)
Gene ID: MGYG000003570_184_12
Type: TC
Location: 10396 - 11673 (-)
Type: TC
Location: 10396 - 11673 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.