Cluster: MGYG000003570_CGC2
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003570
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003570_4 | MGYG000003570_4_5 | 4001 | 4762 | + | 3.A.1.3.10 |
| sulfatase | MGYG000003570_4 | MGYG000003570_4_6 | 5142 | 5660 | + | S1_8 |
| TC | MGYG000003570_4 | MGYG000003570_4_7 | 5687 | 7012 | + | 8.A.59.4.1 |
| CAZyme | MGYG000003570_4 | MGYG000003570_4_8 | 7042 | 8184 | + | CE2 |
| NULL(UNKNOWN) | MGYG000003570_4 | MGYG000003570_4_9 | 8179 | 8874 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000003570_4 | MGYG000003570_4_10 | 8907 | 9980 | - | C40.UNW |
| TC | MGYG000003570_4 | MGYG000003570_4_11 | 10176 | 12209 | + | 4.C.1.1.4 |
| NULL(UNKNOWN) | MGYG000003570_4 | MGYG000003570_4_12 | 12267 | 13553 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000003570_4 | MGYG000003570_4_13 | 13634 | 14329 | - | Pribosyltran |
| TC | MGYG000003570_4 | MGYG000003570_4_14 | 14454 | 16925 | + | 8.A.59.2.2 |
Gene ID: MGYG000003570_4_5
Type: TC
Location: 4001 - 4762 (+)
Type: TC
Location: 4001 - 4762 (+)
Gene ID: MGYG000003570_4_6
Type: sulfatase
Location: 5142 - 5660 (+)
Type: sulfatase
Location: 5142 - 5660 (+)
Gene ID: MGYG000003570_4_7
Type: TC
Location: 5687 - 7012 (+)
Type: TC
Location: 5687 - 7012 (+)
Gene ID: MGYG000003570_4_8
Type: CAZyme
Location: 7042 - 8184 (+)
Type: CAZyme
Location: 7042 - 8184 (+)
Gene ID: MGYG000003570_4_9
Type:
Location: 8179 - 8874 (-)
Type:
Location: 8179 - 8874 (-)
Gene ID: MGYG000003570_4_10
Type: peptidase
Location: 8907 - 9980 (-)
Type: peptidase
Location: 8907 - 9980 (-)
Gene ID: MGYG000003570_4_11
Type: TC
Location: 10176 - 12209 (+)
Type: TC
Location: 10176 - 12209 (+)
Gene ID: MGYG000003570_4_12
Type:
Location: 12267 - 13553 (+)
Type:
Location: 12267 - 13553 (+)
Gene ID: MGYG000003570_4_13
Type: STP
Location: 13634 - 14329 (-)
Type: STP
Location: 13634 - 14329 (-)
Gene ID: MGYG000003570_4_14
Type: TC
Location: 14454 - 16925 (+)
Type: TC
Location: 14454 - 16925 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.