Cluster: MGYG000003570_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003570
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003570_175 | MGYG000003570_175_3 | 4257 | 7526 | + | 1.B.42.2.1 |
| pfam | MGYG000003570_175 | MGYG000003570_175_4 | 7614 | 8429 | + | DUF4197 |
| CAZyme | MGYG000003570_175 | MGYG000003570_175_5 | 8467 | 11217 | - | GH3 |
| TC | MGYG000003570_175 | MGYG000003570_175_6 | 11548 | 12666 | + | 3.A.1.1.22 |
Gene ID: MGYG000003570_175_3
Type: TC
Location: 4257 - 7526 (+)
Type: TC
Location: 4257 - 7526 (+)
Gene ID: MGYG000003570_175_4
Type: pfam
Location: 7614 - 8429 (+)
Type: pfam
Location: 7614 - 8429 (+)
Gene ID: MGYG000003570_175_5
Type: CAZyme
Location: 8467 - 11217 (-)
Type: CAZyme
Location: 8467 - 11217 (-)
Gene ID: MGYG000003570_175_6
Type: TC
Location: 11548 - 12666 (+)
Type: TC
Location: 11548 - 12666 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.