Cluster: MGYG000003570_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003570
- CGC Family ID: CGCFAM_01488
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003570_165 | MGYG000003570_165_10 | 9217 | 9798 | - | 2.A.51.1.6 |
| TC | MGYG000003570_165 | MGYG000003570_165_11 | 9795 | 10388 | - | 2.A.51.1.6 |
| TF | MGYG000003570_165 | MGYG000003570_165_12 | 10397 | 11332 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000003570_165 | MGYG000003570_165_13 | 11532 | 13583 | + | GH31_1 |
| CAZyme | MGYG000003570_165 | MGYG000003570_165_14 | 13667 | 15223 | - | GH77 |
Gene ID: MGYG000003570_165_10
Type: TC
Location: 9217 - 9798 (-)
Type: TC
Location: 9217 - 9798 (-)
Gene ID: MGYG000003570_165_11
Type: TC
Location: 9795 - 10388 (-)
Type: TC
Location: 9795 - 10388 (-)
Gene ID: MGYG000003570_165_12
Type: TF
Location: 10397 - 11332 (-)
Type: TF
Location: 10397 - 11332 (-)
Gene ID: MGYG000003570_165_13
Type: CAZyme
Location: 11532 - 13583 (+)
Type: CAZyme
Location: 11532 - 13583 (+)
Gene ID: MGYG000003570_165_14
Type: CAZyme
Location: 13667 - 15223 (-)
Type: CAZyme
Location: 13667 - 15223 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.