Cluster: MGYG000003570_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003570
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003570_154 | MGYG000003570_154_9 | 10279 | 14070 | - | GH13 |
| CAZyme | MGYG000003570_154 | MGYG000003570_154_10 | 14070 | 16112 | - | GH77 |
| pfam | MGYG000003570_154 | MGYG000003570_154_11 | 16267 | 16974 | - | AA_kinase |
| TC | MGYG000003570_154 | MGYG000003570_154_12 | 16984 | 17637 | - | 3.A.1.3.17 |
| TC | MGYG000003570_154 | MGYG000003570_154_13 | 17675 | 18484 | - | 3.A.1.3.10 |
Gene ID: MGYG000003570_154_9
Type: CAZyme
Location: 10279 - 14070 (-)
Type: CAZyme
Location: 10279 - 14070 (-)
Gene ID: MGYG000003570_154_10
Type: CAZyme
Location: 14070 - 16112 (-)
Type: CAZyme
Location: 14070 - 16112 (-)
Gene ID: MGYG000003570_154_11
Type: pfam
Location: 16267 - 16974 (-)
Type: pfam
Location: 16267 - 16974 (-)
Gene ID: MGYG000003570_154_12
Type: TC
Location: 16984 - 17637 (-)
Type: TC
Location: 16984 - 17637 (-)
Gene ID: MGYG000003570_154_13
Type: TC
Location: 17675 - 18484 (-)
Type: TC
Location: 17675 - 18484 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.