Cluster: MGYG000003570_CGC12
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003570
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003570_115 | MGYG000003570_115_6 | 4615 | 5559 | + | GH26 |
| peptidase | MGYG000003570_115 | MGYG000003570_115_7 | 5831 | 7660 | + | M03.UPB |
| CAZyme | MGYG000003570_115 | MGYG000003570_115_8 | 7689 | 8897 | + | GH5_4 |
| STP | MGYG000003570_115 | MGYG000003570_115_9 | 8908 | 9951 | - | PfkB |
| pfam | MGYG000003570_115 | MGYG000003570_115_10 | 9969 | 10769 | - | AA_kinase |
| CAZyme | MGYG000003570_115 | MGYG000003570_115_11 | 10867 | 12321 | + | GH32 |
| pfam | MGYG000003570_115 | MGYG000003570_115_12 | 12329 | 13603 | - | Aldedh |
| NULL(UNKNOWN) | MGYG000003570_115 | MGYG000003570_115_13 | 13628 | 14170 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003570_115 | MGYG000003570_115_14 | 14277 | 15611 | + | 2.A.40.7.2 |
| pfam | MGYG000003570_115 | MGYG000003570_115_15 | 15632 | 16228 | - | PCMT | Methyltransf_3 | MTS | Methyltransf_24 |
| NULL(UNKNOWN) | MGYG000003570_115 | MGYG000003570_115_16 | 16247 | 16621 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003570_115 | MGYG000003570_115_17 | 16643 | 17179 | - | 9.B.105.1.5 |
Gene ID: MGYG000003570_115_6
Type: CAZyme
Location: 4615 - 5559 (+)
Type: CAZyme
Location: 4615 - 5559 (+)
Gene ID: MGYG000003570_115_7
Type: peptidase
Location: 5831 - 7660 (+)
Type: peptidase
Location: 5831 - 7660 (+)
Gene ID: MGYG000003570_115_8
Type: CAZyme
Location: 7689 - 8897 (+)
Type: CAZyme
Location: 7689 - 8897 (+)
Gene ID: MGYG000003570_115_9
Type: STP
Location: 8908 - 9951 (-)
Type: STP
Location: 8908 - 9951 (-)
Gene ID: MGYG000003570_115_10
Type: pfam
Location: 9969 - 10769 (-)
Type: pfam
Location: 9969 - 10769 (-)
Gene ID: MGYG000003570_115_11
Type: CAZyme
Location: 10867 - 12321 (+)
Type: CAZyme
Location: 10867 - 12321 (+)
Gene ID: MGYG000003570_115_12
Type: pfam
Location: 12329 - 13603 (-)
Type: pfam
Location: 12329 - 13603 (-)
Gene ID: MGYG000003570_115_13
Type:
Location: 13628 - 14170 (-)
Type:
Location: 13628 - 14170 (-)
Gene ID: MGYG000003570_115_14
Type: TC
Location: 14277 - 15611 (+)
Type: TC
Location: 14277 - 15611 (+)
Gene ID: MGYG000003570_115_15
Type: pfam
Location: 15632 - 16228 (-)
Type: pfam
Location: 15632 - 16228 (-)
Gene ID: MGYG000003570_115_16
Type:
Location: 16247 - 16621 (-)
Type:
Location: 16247 - 16621 (-)
Gene ID: MGYG000003570_115_17
Type: TC
Location: 16643 - 17179 (-)
Type: TC
Location: 16643 - 17179 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.