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Cluster: MGYG000003570_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003570_108 MGYG000003570_108_7 5926 7608 + GH5_25
pfam MGYG000003570_108 MGYG000003570_108_8 7621 9711 - Gln-synt_C | GSIII_N | Gln-synt_C-ter
pfam MGYG000003570_108 MGYG000003570_108_9 9919 11454 + Pallilysin
TC MGYG000003570_108 MGYG000003570_108_10 11473 12849 + 8.A.59.4.2
pfam MGYG000003570_108 MGYG000003570_108_11 13249 14727 + KARI_C | KARI_C | KARI_N
TC MGYG000003570_108 MGYG000003570_108_12 14795 16003 + 2.A.4.7.2
NULL(UNKNOWN) MGYG000003570_108 MGYG000003570_108_13 16053 16523 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000003570_108 MGYG000003570_108_14 16530 16970 - FliS
TC MGYG000003570_108 MGYG000003570_108_15 17214 19280 + 3.A.16.1.1
Gene ID: MGYG000003570_108_7
Type: CAZyme
Location: 5926 - 7608 (+)
Gene ID: MGYG000003570_108_8
Type: pfam
Location: 7621 - 9711 (-)
Gene ID: MGYG000003570_108_9
Type: pfam
Location: 9919 - 11454 (+)
Gene ID: MGYG000003570_108_10
Type: TC
Location: 11473 - 12849 (+)
Gene ID: MGYG000003570_108_11
Type: pfam
Location: 13249 - 14727 (+)
Gene ID: MGYG000003570_108_12
Type: TC
Location: 14795 - 16003 (+)
Gene ID: MGYG000003570_108_13
Type:
Location: 16053 - 16523 (-)
Gene ID: MGYG000003570_108_14
Type: pfam
Location: 16530 - 16970 (-)
Gene ID: MGYG000003570_108_15
Type: TC
Location: 17214 - 19280 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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