Cluster: MGYG000003569_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003569
- CGC Family ID: CGCFAM_10965
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003569_38 | MGYG000003569_38_8 | 8590 | 10173 | + | GH77 |
| TF | MGYG000003569_38 | MGYG000003569_38_9 | 10174 | 10824 | - | GerE |
| STP | MGYG000003569_38 | MGYG000003569_38_10 | 10870 | 12984 | + | HATPase_c | Peripla_BP_3 |
| TC | MGYG000003569_38 | MGYG000003569_38_11 | 13037 | 13918 | - | 8.A.21.2.2 |
Gene ID: MGYG000003569_38_8
Type: CAZyme
Location: 8590 - 10173 (+)
Type: CAZyme
Location: 8590 - 10173 (+)
Gene ID: MGYG000003569_38_9
Type: TF
Location: 10174 - 10824 (-)
Type: TF
Location: 10174 - 10824 (-)
Gene ID: MGYG000003569_38_10
Type: STP
Location: 10870 - 12984 (+)
Type: STP
Location: 10870 - 12984 (+)
Gene ID: MGYG000003569_38_11
Type: TC
Location: 13037 - 13918 (-)
Type: TC
Location: 13037 - 13918 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.