Cluster: MGYG000003569_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003569
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003569_20 | MGYG000003569_20_6 | 3358 | 4404 | - | GH130_2 |
| CAZyme | MGYG000003569_20 | MGYG000003569_20_7 | 4617 | 5750 | + | CE2 |
| pfam | MGYG000003569_20 | MGYG000003569_20_8 | 5923 | 6528 | - | Mann_GBD_bact |
| CAZyme | MGYG000003569_20 | MGYG000003569_20_9 | 6780 | 8207 | + | GH26 |
| CAZyme | MGYG000003569_20 | MGYG000003569_20_10 | 8208 | 9446 | + | CE17 |
| NULL(UNKNOWN) | MGYG000003569_20 | MGYG000003569_20_11 | 9490 | 9906 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003569_20 | MGYG000003569_20_12 | 9966 | 11477 | - | 8.A.59.4.1 |
Gene ID: MGYG000003569_20_6
Type: CAZyme
Location: 3358 - 4404 (-)
Type: CAZyme
Location: 3358 - 4404 (-)
Gene ID: MGYG000003569_20_7
Type: CAZyme
Location: 4617 - 5750 (+)
Type: CAZyme
Location: 4617 - 5750 (+)
Gene ID: MGYG000003569_20_8
Type: pfam
Location: 5923 - 6528 (-)
Type: pfam
Location: 5923 - 6528 (-)
Gene ID: MGYG000003569_20_9
Type: CAZyme
Location: 6780 - 8207 (+)
Type: CAZyme
Location: 6780 - 8207 (+)
Gene ID: MGYG000003569_20_10
Type: CAZyme
Location: 8208 - 9446 (+)
Type: CAZyme
Location: 8208 - 9446 (+)
Gene ID: MGYG000003569_20_11
Type:
Location: 9490 - 9906 (+)
Type:
Location: 9490 - 9906 (+)
Gene ID: MGYG000003569_20_12
Type: TC
Location: 9966 - 11477 (-)
Type: TC
Location: 9966 - 11477 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.