Cluster: MGYG000003569_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003569
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003569_290 | MGYG000003569_290_66 | 70930 | 72036 | + | 3.A.1.2.20 |
| pfam | MGYG000003569_290 | MGYG000003569_290_67 | 72068 | 72979 | + | BPD_transp_2 |
| pfam | MGYG000003569_290 | MGYG000003569_290_68 | 72969 | 73778 | + | BPD_transp_2 |
| TC | MGYG000003569_290 | MGYG000003569_290_69 | 73755 | 75785 | - | 1.B.52.2.1 |
| pfam | MGYG000003569_290 | MGYG000003569_290_70 | 75921 | 77360 | - | SLBB | SLBB | SLBB_2 |
| TF | MGYG000003569_290 | MGYG000003569_290_71 | 77643 | 77999 | + | HTH_3 |
| CAZyme | MGYG000003569_290 | MGYG000003569_290_72 | 78229 | 79593 | + | GH5_4 |
Gene ID: MGYG000003569_290_66
Type: TC
Location: 70930 - 72036 (+)
Type: TC
Location: 70930 - 72036 (+)
Gene ID: MGYG000003569_290_67
Type: pfam
Location: 72068 - 72979 (+)
Type: pfam
Location: 72068 - 72979 (+)
Gene ID: MGYG000003569_290_68
Type: pfam
Location: 72969 - 73778 (+)
Type: pfam
Location: 72969 - 73778 (+)
Gene ID: MGYG000003569_290_69
Type: TC
Location: 73755 - 75785 (-)
Type: TC
Location: 73755 - 75785 (-)
Gene ID: MGYG000003569_290_70
Type: pfam
Location: 75921 - 77360 (-)
Type: pfam
Location: 75921 - 77360 (-)
Gene ID: MGYG000003569_290_71
Type: TF
Location: 77643 - 77999 (+)
Type: TF
Location: 77643 - 77999 (+)
Gene ID: MGYG000003569_290_72
Type: CAZyme
Location: 78229 - 79593 (+)
Type: CAZyme
Location: 78229 - 79593 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.