Cluster: MGYG000003569_CGC30
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003569
- CGC Family ID: CGCFAM_01145
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003569_234 | MGYG000003569_234_11 | 14132 | 15415 | - | 2.A.21.9.1 |
| pfam | MGYG000003569_234 | MGYG000003569_234_12 | 15431 | 16672 | - | DNA_pol3_delta2 |
| TC | MGYG000003569_234 | MGYG000003569_234_13 | 16665 | 17159 | - | 9.B.160.1.11 |
| CAZyme | MGYG000003569_234 | MGYG000003569_234_14 | 17218 | 18369 | - | GT28 |
| TC | MGYG000003569_234 | MGYG000003569_234_15 | 19092 | 19520 | - | 3.A.2.3.3 |
| TC | MGYG000003569_234 | MGYG000003569_234_16 | 19585 | 21513 | - | 3.A.2.3.3 |
| TC | MGYG000003569_234 | MGYG000003569_234_17 | 21513 | 22133 | - | 3.A.2.3.3 |
| TC | MGYG000003569_234 | MGYG000003569_234_18 | 22214 | 23506 | - | 3.A.2.3.3 |
| TC | MGYG000003569_234 | MGYG000003569_234_19 | 23506 | 25275 | - | 3.A.2.3.3 |
Gene ID: MGYG000003569_234_11
Type: TC
Location: 14132 - 15415 (-)
Type: TC
Location: 14132 - 15415 (-)
Gene ID: MGYG000003569_234_12
Type: pfam
Location: 15431 - 16672 (-)
Type: pfam
Location: 15431 - 16672 (-)
Gene ID: MGYG000003569_234_13
Type: TC
Location: 16665 - 17159 (-)
Type: TC
Location: 16665 - 17159 (-)
Gene ID: MGYG000003569_234_14
Type: CAZyme
Location: 17218 - 18369 (-)
Type: CAZyme
Location: 17218 - 18369 (-)
Gene ID: MGYG000003569_234_15
Type: TC
Location: 19092 - 19520 (-)
Type: TC
Location: 19092 - 19520 (-)
Gene ID: MGYG000003569_234_16
Type: TC
Location: 19585 - 21513 (-)
Type: TC
Location: 19585 - 21513 (-)
Gene ID: MGYG000003569_234_17
Type: TC
Location: 21513 - 22133 (-)
Type: TC
Location: 21513 - 22133 (-)
Gene ID: MGYG000003569_234_18
Type: TC
Location: 22214 - 23506 (-)
Type: TC
Location: 22214 - 23506 (-)
Gene ID: MGYG000003569_234_19
Type: TC
Location: 23506 - 25275 (-)
Type: TC
Location: 23506 - 25275 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.