Cluster: MGYG000003569_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003569
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003569_233 | MGYG000003569_233_12 | 15882 | 16868 | - | 3.A.1.20.1 |
| TC | MGYG000003569_233 | MGYG000003569_233_13 | 16844 | 18511 | - | 3.A.1.20.2 |
| TC | MGYG000003569_233 | MGYG000003569_233_14 | 18490 | 19503 | - | 3.A.1.20.2 |
| NULL(UNKNOWN) | MGYG000003569_233 | MGYG000003569_233_15 | 19648 | 19824 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003569_233 | MGYG000003569_233_16 | 19943 | 21235 | + | MFS_1 |
| CAZyme | MGYG000003569_233 | MGYG000003569_233_17 | 21345 | 23012 | + | GH43_10 |
Gene ID: MGYG000003569_233_12
Type: TC
Location: 15882 - 16868 (-)
Type: TC
Location: 15882 - 16868 (-)
Gene ID: MGYG000003569_233_13
Type: TC
Location: 16844 - 18511 (-)
Type: TC
Location: 16844 - 18511 (-)
Gene ID: MGYG000003569_233_14
Type: TC
Location: 18490 - 19503 (-)
Type: TC
Location: 18490 - 19503 (-)
Gene ID: MGYG000003569_233_15
Type:
Location: 19648 - 19824 (+)
Type:
Location: 19648 - 19824 (+)
Gene ID: MGYG000003569_233_16
Type: pfam
Location: 19943 - 21235 (+)
Type: pfam
Location: 19943 - 21235 (+)
Gene ID: MGYG000003569_233_17
Type: CAZyme
Location: 21345 - 23012 (+)
Type: CAZyme
Location: 21345 - 23012 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.