Cluster: MGYG000003569_CGC23
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003569
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003569_186 | MGYG000003569_186_19 | 20562 | 22667 | + | GH13_11 |
| CAZyme | MGYG000003569_186 | MGYG000003569_186_20 | 22768 | 25215 | + | GT35 |
| TC | MGYG000003569_186 | MGYG000003569_186_21 | 25497 | 26378 | + | 2.A.7.3.29 |
| TC | MGYG000003569_186 | MGYG000003569_186_22 | 26415 | 27191 | + | 3.A.1.3.27 |
| TC | MGYG000003569_186 | MGYG000003569_186_23 | 27825 | 28886 | + | 9.A.23.1.1 |
| NULL(UNKNOWN) | MGYG000003569_186 | MGYG000003569_186_24 | 29237 | 29506 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003569_186 | MGYG000003569_186_25 | 29503 | 32028 | + | GH59 | GH59 |
| TC | MGYG000003569_186 | MGYG000003569_186_26 | 32021 | 33364 | + | 2.A.66.1.33 |
| NULL(UNKNOWN) | MGYG000003569_186 | MGYG000003569_186_27 | 33643 | 34008 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003569_186 | MGYG000003569_186_28 | 34492 | 36918 | + | GH94 |
Gene ID: MGYG000003569_186_19
Type: CAZyme
Location: 20562 - 22667 (+)
Type: CAZyme
Location: 20562 - 22667 (+)
Gene ID: MGYG000003569_186_20
Type: CAZyme
Location: 22768 - 25215 (+)
Type: CAZyme
Location: 22768 - 25215 (+)
Gene ID: MGYG000003569_186_21
Type: TC
Location: 25497 - 26378 (+)
Type: TC
Location: 25497 - 26378 (+)
Gene ID: MGYG000003569_186_22
Type: TC
Location: 26415 - 27191 (+)
Type: TC
Location: 26415 - 27191 (+)
Gene ID: MGYG000003569_186_23
Type: TC
Location: 27825 - 28886 (+)
Type: TC
Location: 27825 - 28886 (+)
Gene ID: MGYG000003569_186_24
Type:
Location: 29237 - 29506 (+)
Type:
Location: 29237 - 29506 (+)
Gene ID: MGYG000003569_186_25
Type: CAZyme
Location: 29503 - 32028 (+)
Type: CAZyme
Location: 29503 - 32028 (+)
Gene ID: MGYG000003569_186_26
Type: TC
Location: 32021 - 33364 (+)
Type: TC
Location: 32021 - 33364 (+)
Gene ID: MGYG000003569_186_27
Type:
Location: 33643 - 34008 (-)
Type:
Location: 33643 - 34008 (-)
Gene ID: MGYG000003569_186_28
Type: CAZyme
Location: 34492 - 36918 (+)
Type: CAZyme
Location: 34492 - 36918 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.