Cluster: MGYG000003569_CGC19
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003569
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003569_162 | MGYG000003569_162_4 | 4603 | 5871 | - | 2.A.23.4.1 |
| TC | MGYG000003569_162 | MGYG000003569_162_5 | 6020 | 7369 | + | 3.D.6.1.2 |
| TC | MGYG000003569_162 | MGYG000003569_162_6 | 7383 | 8474 | + | 3.D.6.1.2 |
| pfam | MGYG000003569_162 | MGYG000003569_162_7 | 8568 | 9170 | + | FMN_bind |
| TC | MGYG000003569_162 | MGYG000003569_162_8 | 9163 | 9789 | + | 3.D.6.1.2 |
| TC | MGYG000003569_162 | MGYG000003569_162_9 | 9814 | 10401 | + | 3.D.6.1.4 |
| TC | MGYG000003569_162 | MGYG000003569_162_10 | 10430 | 11233 | + | 3.D.6.1.2 |
| TC | MGYG000003569_162 | MGYG000003569_162_11 | 11290 | 12594 | + | 2.A.40.7.2 |
| pfam | MGYG000003569_162 | MGYG000003569_162_12 | 12676 | 13209 | - | Aconitase_C |
| pfam | MGYG000003569_162 | MGYG000003569_162_13 | 13465 | 14748 | - | Aconitase | Aconitase |
| CAZyme | MGYG000003569_162 | MGYG000003569_162_14 | 14923 | 16911 | + | GH31_4 |
Gene ID: MGYG000003569_162_4
Type: TC
Location: 4603 - 5871 (-)
Type: TC
Location: 4603 - 5871 (-)
Gene ID: MGYG000003569_162_5
Type: TC
Location: 6020 - 7369 (+)
Type: TC
Location: 6020 - 7369 (+)
Gene ID: MGYG000003569_162_6
Type: TC
Location: 7383 - 8474 (+)
Type: TC
Location: 7383 - 8474 (+)
Gene ID: MGYG000003569_162_7
Type: pfam
Location: 8568 - 9170 (+)
Type: pfam
Location: 8568 - 9170 (+)
Gene ID: MGYG000003569_162_8
Type: TC
Location: 9163 - 9789 (+)
Type: TC
Location: 9163 - 9789 (+)
Gene ID: MGYG000003569_162_9
Type: TC
Location: 9814 - 10401 (+)
Type: TC
Location: 9814 - 10401 (+)
Gene ID: MGYG000003569_162_10
Type: TC
Location: 10430 - 11233 (+)
Type: TC
Location: 10430 - 11233 (+)
Gene ID: MGYG000003569_162_11
Type: TC
Location: 11290 - 12594 (+)
Type: TC
Location: 11290 - 12594 (+)
Gene ID: MGYG000003569_162_12
Type: pfam
Location: 12676 - 13209 (-)
Type: pfam
Location: 12676 - 13209 (-)
Gene ID: MGYG000003569_162_13
Type: pfam
Location: 13465 - 14748 (-)
Type: pfam
Location: 13465 - 14748 (-)
Gene ID: MGYG000003569_162_14
Type: CAZyme
Location: 14923 - 16911 (+)
Type: CAZyme
Location: 14923 - 16911 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.