Cluster: MGYG000003569_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003569
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003569_142 | MGYG000003569_142_34 | 37201 | 38685 | - | GH77 |
| TF | MGYG000003569_142 | MGYG000003569_142_35 | 38733 | 39737 | - | LacI |
| TC | MGYG000003569_142 | MGYG000003569_142_36 | 39742 | 40593 | - | 3.A.1.1.45 |
| TC | MGYG000003569_142 | MGYG000003569_142_37 | 40593 | 41456 | - | 3.A.1.1.45 |
| TC | MGYG000003569_142 | MGYG000003569_142_38 | 41921 | 43243 | - | 3.A.1.1.45 |
Gene ID: MGYG000003569_142_34
Type: CAZyme
Location: 37201 - 38685 (-)
Type: CAZyme
Location: 37201 - 38685 (-)
Gene ID: MGYG000003569_142_35
Type: TF
Location: 38733 - 39737 (-)
Type: TF
Location: 38733 - 39737 (-)
Gene ID: MGYG000003569_142_36
Type: TC
Location: 39742 - 40593 (-)
Type: TC
Location: 39742 - 40593 (-)
Gene ID: MGYG000003569_142_37
Type: TC
Location: 40593 - 41456 (-)
Type: TC
Location: 40593 - 41456 (-)
Gene ID: MGYG000003569_142_38
Type: TC
Location: 41921 - 43243 (-)
Type: TC
Location: 41921 - 43243 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.