Cluster: MGYG000003569_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003569
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003569_94 | MGYG000003569_94_20 | 21694 | 23652 | - | 1.A.33.1.2 |
| pfam | MGYG000003569_94 | MGYG000003569_94_21 | 23754 | 24389 | - | GrpE |
| CAZyme | MGYG000003569_94 | MGYG000003569_94_22 | 24628 | 26460 | + | GH146 |
| pfam | MGYG000003569_94 | MGYG000003569_94_23 | 26578 | 28263 | - | ILVD_EDD_N | ILV_EDD_C |
| pfam | MGYG000003569_94 | MGYG000003569_94_24 | 28294 | 29922 | - | LRR_5 | LRR_5 |
| CAZyme | MGYG000003569_94 | MGYG000003569_94_25 | 29932 | 31170 | - | GH5_4 |
Gene ID: MGYG000003569_94_20
Type: TC
Location: 21694 - 23652 (-)
Type: TC
Location: 21694 - 23652 (-)
Gene ID: MGYG000003569_94_21
Type: pfam
Location: 23754 - 24389 (-)
Type: pfam
Location: 23754 - 24389 (-)
Gene ID: MGYG000003569_94_22
Type: CAZyme
Location: 24628 - 26460 (+)
Type: CAZyme
Location: 24628 - 26460 (+)
Gene ID: MGYG000003569_94_23
Type: pfam
Location: 26578 - 28263 (-)
Type: pfam
Location: 26578 - 28263 (-)
Gene ID: MGYG000003569_94_24
Type: pfam
Location: 28294 - 29922 (-)
Type: pfam
Location: 28294 - 29922 (-)
Gene ID: MGYG000003569_94_25
Type: CAZyme
Location: 29932 - 31170 (-)
Type: CAZyme
Location: 29932 - 31170 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.