Cluster: MGYG000003569_CGC13
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003569
- CGC Family ID: CGCFAM_00036
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003569_78 | MGYG000003569_78_33 | 34873 | 35877 | + | GT2 |
| TC | MGYG000003569_78 | MGYG000003569_78_34 | 35870 | 37318 | + | 2.A.66.2.16 |
| pfam | MGYG000003569_78 | MGYG000003569_78_35 | 37355 | 38500 | + | GLF | NAD_binding_8 |
| CAZyme | MGYG000003569_78 | MGYG000003569_78_36 | 38506 | 39456 | + | GT2 |
| CAZyme | MGYG000003569_78 | MGYG000003569_78_37 | 39465 | 40565 | + | GT4 |
| CAZyme | MGYG000003569_78 | MGYG000003569_78_38 | 40552 | 41499 | + | GT32 |
| CAZyme | MGYG000003569_78 | MGYG000003569_78_39 | 41539 | 42321 | + | GT111 |
| CAZyme | MGYG000003569_78 | MGYG000003569_78_40 | 42305 | 43306 | + | GT2 |
| NULL(UNKNOWN) | MGYG000003569_78 | MGYG000003569_78_41 | 43307 | 45250 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003569_78 | MGYG000003569_78_42 | 45446 | 47143 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003569_78 | MGYG000003569_78_43 | 47242 | 48702 | + | 9.B.18.1.2 |
Gene ID: MGYG000003569_78_33
Type: CAZyme
Location: 34873 - 35877 (+)
Type: CAZyme
Location: 34873 - 35877 (+)
Gene ID: MGYG000003569_78_34
Type: TC
Location: 35870 - 37318 (+)
Type: TC
Location: 35870 - 37318 (+)
Gene ID: MGYG000003569_78_35
Type: pfam
Location: 37355 - 38500 (+)
Type: pfam
Location: 37355 - 38500 (+)
Gene ID: MGYG000003569_78_36
Type: CAZyme
Location: 38506 - 39456 (+)
Type: CAZyme
Location: 38506 - 39456 (+)
Gene ID: MGYG000003569_78_37
Type: CAZyme
Location: 39465 - 40565 (+)
Type: CAZyme
Location: 39465 - 40565 (+)
Gene ID: MGYG000003569_78_38
Type: CAZyme
Location: 40552 - 41499 (+)
Type: CAZyme
Location: 40552 - 41499 (+)
Gene ID: MGYG000003569_78_39
Type: CAZyme
Location: 41539 - 42321 (+)
Type: CAZyme
Location: 41539 - 42321 (+)
Gene ID: MGYG000003569_78_40
Type: CAZyme
Location: 42305 - 43306 (+)
Type: CAZyme
Location: 42305 - 43306 (+)
Gene ID: MGYG000003569_78_41
Type:
Location: 43307 - 45250 (-)
Type:
Location: 43307 - 45250 (-)
Gene ID: MGYG000003569_78_42
Type:
Location: 45446 - 47143 (+)
Type:
Location: 45446 - 47143 (+)
Gene ID: MGYG000003569_78_43
Type: TC
Location: 47242 - 48702 (+)
Type: TC
Location: 47242 - 48702 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.