Cluster: MGYG000003569_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003569
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003569_59 | MGYG000003569_59_2 | 325 | 1224 | + | 9.A.25.1.1 |
| pfam | MGYG000003569_59 | MGYG000003569_59_3 | 1221 | 1901 | + | DUF4405 |
| peptidase | MGYG000003569_59 | MGYG000003569_59_4 | 1906 | 2625 | - | M15.021 |
| CAZyme | MGYG000003569_59 | MGYG000003569_59_5 | 2758 | 3969 | - | GT4 |
| TC | MGYG000003569_59 | MGYG000003569_59_6 | 4209 | 4955 | + | 3.A.1.147.6 |
Gene ID: MGYG000003569_59_2
Type: TC
Location: 325 - 1224 (+)
Type: TC
Location: 325 - 1224 (+)
Gene ID: MGYG000003569_59_3
Type: pfam
Location: 1221 - 1901 (+)
Type: pfam
Location: 1221 - 1901 (+)
Gene ID: MGYG000003569_59_4
Type: peptidase
Location: 1906 - 2625 (-)
Type: peptidase
Location: 1906 - 2625 (-)
Gene ID: MGYG000003569_59_5
Type: CAZyme
Location: 2758 - 3969 (-)
Type: CAZyme
Location: 2758 - 3969 (-)
Gene ID: MGYG000003569_59_6
Type: TC
Location: 4209 - 4955 (+)
Type: TC
Location: 4209 - 4955 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema_D
Species
Treponema_D sp900769975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.