Cluster: MGYG000003550_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: MGYG000003550
- CGC Family ID: CGCFAM_00010
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003550_31 | MGYG000003550_31_15 | 15925 | 16791 | + | 3.A.1.1.45 |
| TC | MGYG000003550_31 | MGYG000003550_31_16 | 16791 | 17693 | + | 3.A.1.1.45 |
| CAZyme | MGYG000003550_31 | MGYG000003550_31_17 | 17911 | 19455 | + | GH77 |
| TF | MGYG000003550_31 | MGYG000003550_31_18 | 19706 | 20707 | + | LacI |
| CAZyme | MGYG000003550_31 | MGYG000003550_31_19 | 20975 | 22639 | + | GH13_31 |
| TC | MGYG000003550_31 | MGYG000003550_31_20 | 22747 | 24405 | + | 4.A.1.1.17 |
Gene ID: MGYG000003550_31_15
Type: TC
Location: 15925 - 16791 (+)
Type: TC
Location: 15925 - 16791 (+)
Gene ID: MGYG000003550_31_16
Type: TC
Location: 16791 - 17693 (+)
Type: TC
Location: 16791 - 17693 (+)
Gene ID: MGYG000003550_31_17
Type: CAZyme
Location: 17911 - 19455 (+)
Type: CAZyme
Location: 17911 - 19455 (+)
Gene ID: MGYG000003550_31_18
Type: TF
Location: 19706 - 20707 (+)
Type: TF
Location: 19706 - 20707 (+)
Gene ID: MGYG000003550_31_19
Type: CAZyme
Location: 20975 - 22639 (+)
Type: CAZyme
Location: 20975 - 22639 (+)
Gene ID: MGYG000003550_31_20
Type: TC
Location: 22747 - 24405 (+)
Type: TC
Location: 22747 - 24405 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900769625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.