Cluster: MGYG000003550_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003550
- CGC Family ID: CGCFAM_00591
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003550_69 | MGYG000003550_69_12 | 12540 | 13955 | + | GH13_18 |
| TF | MGYG000003550_69 | MGYG000003550_69_13 | 14047 | 14916 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000003550_69 | MGYG000003550_69_14 | 15103 | 17298 | + | GH36 |
| TC | MGYG000003550_69 | MGYG000003550_69_15 | 17554 | 18828 | + | 3.A.1.1.20 |
| TC | MGYG000003550_69 | MGYG000003550_69_16 | 18960 | 19892 | + | 3.A.1.1.11 |
| TC | MGYG000003550_69 | MGYG000003550_69_17 | 19911 | 20738 | + | 3.A.1.1.34 |
Gene ID: MGYG000003550_69_12
Type: CAZyme
Location: 12540 - 13955 (+)
Type: CAZyme
Location: 12540 - 13955 (+)
Gene ID: MGYG000003550_69_13
Type: TF
Location: 14047 - 14916 (-)
Type: TF
Location: 14047 - 14916 (-)
Gene ID: MGYG000003550_69_14
Type: CAZyme
Location: 15103 - 17298 (+)
Type: CAZyme
Location: 15103 - 17298 (+)
Gene ID: MGYG000003550_69_15
Type: TC
Location: 17554 - 18828 (+)
Type: TC
Location: 17554 - 18828 (+)
Gene ID: MGYG000003550_69_16
Type: TC
Location: 18960 - 19892 (+)
Type: TC
Location: 18960 - 19892 (+)
Gene ID: MGYG000003550_69_17
Type: TC
Location: 19911 - 20738 (+)
Type: TC
Location: 19911 - 20738 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900769625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.