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Cluster: MGYG000003550_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003550_11 MGYG000003550_11_9 7089 9059 - GH13_14
CAZyme MGYG000003550_11 MGYG000003550_11_10 9061 10419 - GH133
TC MGYG000003550_11 MGYG000003550_11_11 10909 12399 - 3.A.1.1.9
NULL(UNKNOWN) MGYG000003550_11 MGYG000003550_11_12 12490 12600 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003550_11 MGYG000003550_11_13 12674 13522 - 3.A.1.1.27
TC MGYG000003550_11 MGYG000003550_11_14 13522 14226 - 3.A.1.1.27
TC MGYG000003550_11 MGYG000003550_11_15 14211 14699 - 3.A.1.1.27
NULL(UNKNOWN) MGYG000003550_11 MGYG000003550_11_16 14693 14914 - NULL(UNKNOWN)
[View Structural Homologs]
STP MGYG000003550_11 MGYG000003550_11_17 15062 16336 - SBP_bac_1
TC MGYG000003550_11 MGYG000003550_11_18 16860 18512 - 8.A.59.2.1
Gene ID: MGYG000003550_11_9
Type: CAZyme
Location: 7089 - 9059 (-)
Gene ID: MGYG000003550_11_10
Type: CAZyme
Location: 9061 - 10419 (-)
Gene ID: MGYG000003550_11_11
Type: TC
Location: 10909 - 12399 (-)
Gene ID: MGYG000003550_11_12
Type:
Location: 12490 - 12600 (-)
Gene ID: MGYG000003550_11_13
Type: TC
Location: 12674 - 13522 (-)
Gene ID: MGYG000003550_11_14
Type: TC
Location: 13522 - 14226 (-)
Gene ID: MGYG000003550_11_15
Type: TC
Location: 14211 - 14699 (-)
Gene ID: MGYG000003550_11_16
Type:
Location: 14693 - 14914 (-)
Gene ID: MGYG000003550_11_17
Type: STP
Location: 15062 - 16336 (-)
Gene ID: MGYG000003550_11_18
Type: TC
Location: 16860 - 18512 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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