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Cluster: MGYG000003550_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003550_60 MGYG000003550_60_12 17037 18002 + GT2
pfam MGYG000003550_60 MGYG000003550_60_13 18016 18858 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC MGYG000003550_60 MGYG000003550_60_14 18930 19706 + 3.A.1.103.1
TC MGYG000003550_60 MGYG000003550_60_15 19757 20470 + 3.A.1.103.1
CAZyme MGYG000003550_60 MGYG000003550_60_16 20454 22343 + GT2
pfam MGYG000003550_60 MGYG000003550_60_17 22340 23440 + GLF | NAD_binding_8
CAZyme MGYG000003550_60 MGYG000003550_60_18 23443 24183 + GT111
CAZyme MGYG000003550_60 MGYG000003550_60_19 24198 25796 + GT8
CAZyme MGYG000003550_60 MGYG000003550_60_20 25816 26982 + GT111
Gene ID: MGYG000003550_60_12
Type: CAZyme
Location: 17037 - 18002 (+)
Gene ID: MGYG000003550_60_13
Type: pfam
Location: 18016 - 18858 (+)
Gene ID: MGYG000003550_60_14
Type: TC
Location: 18930 - 19706 (+)
Gene ID: MGYG000003550_60_15
Type: TC
Location: 19757 - 20470 (+)
Gene ID: MGYG000003550_60_16
Type: CAZyme
Location: 20454 - 22343 (+)
Gene ID: MGYG000003550_60_17
Type: pfam
Location: 22340 - 23440 (+)
Gene ID: MGYG000003550_60_18
Type: CAZyme
Location: 23443 - 24183 (+)
Gene ID: MGYG000003550_60_19
Type: CAZyme
Location: 24198 - 25796 (+)
Gene ID: MGYG000003550_60_20
Type: CAZyme
Location: 25816 - 26982 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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