Cluster: MGYG000003546_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003546
- CGC Family ID: CGCFAM_00075
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003546_32 | MGYG000003546_32_2 | 1221 | 3722 | - | 3.A.9.1.2 |
| pfam | MGYG000003546_32 | MGYG000003546_32_3 | 4231 | 6771 | + | DNA_topoisoIV | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C |
| STP | MGYG000003546_32 | MGYG000003546_32_4 | 6807 | 8012 | + | TPR_1 |
| CAZyme | MGYG000003546_32 | MGYG000003546_32_5 | 8321 | 9112 | + | GT2 |
| CAZyme | MGYG000003546_32 | MGYG000003546_32_6 | 9156 | 10016 | + | GT2 |
| TC | MGYG000003546_32 | MGYG000003546_32_7 | 10120 | 11889 | - | 3.A.6.1.1 |
Gene ID: MGYG000003546_32_2
Type: TC
Location: 1221 - 3722 (-)
Type: TC
Location: 1221 - 3722 (-)
Gene ID: MGYG000003546_32_3
Type: pfam
Location: 4231 - 6771 (+)
Type: pfam
Location: 4231 - 6771 (+)
Gene ID: MGYG000003546_32_4
Type: STP
Location: 6807 - 8012 (+)
Type: STP
Location: 6807 - 8012 (+)
Gene ID: MGYG000003546_32_5
Type: CAZyme
Location: 8321 - 9112 (+)
Type: CAZyme
Location: 8321 - 9112 (+)
Gene ID: MGYG000003546_32_6
Type: CAZyme
Location: 9156 - 10016 (+)
Type: CAZyme
Location: 9156 - 10016 (+)
Gene ID: MGYG000003546_32_7
Type: TC
Location: 10120 - 11889 (-)
Type: TC
Location: 10120 - 11889 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
UBA1181
Species
UBA1181 sp900769555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.