Cluster: MGYG000003546_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003546
- CGC Family ID: CGCFAM_03556
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003546_128 | MGYG000003546_128_32 | 33599 | 36163 | + | CBM6 | CE1 | CE6 |
| pfam | MGYG000003546_128 | MGYG000003546_128_33 | 36493 | 38505 | - | Helicase_C | UVR | ResIII | UvrB | UvrB_inter |
| TF | MGYG000003546_128 | MGYG000003546_128_34 | 38522 | 38704 | - | PspC |
| TC | MGYG000003546_128 | MGYG000003546_128_35 | 39018 | 40508 | - | 2.A.36.6.11 |
Gene ID: MGYG000003546_128_32
Type: CAZyme
Location: 33599 - 36163 (+)
Type: CAZyme
Location: 33599 - 36163 (+)
Gene ID: MGYG000003546_128_33
Type: pfam
Location: 36493 - 38505 (-)
Type: pfam
Location: 36493 - 38505 (-)
Gene ID: MGYG000003546_128_34
Type: TF
Location: 38522 - 38704 (-)
Type: TF
Location: 38522 - 38704 (-)
Gene ID: MGYG000003546_128_35
Type: TC
Location: 39018 - 40508 (-)
Type: TC
Location: 39018 - 40508 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
UBA1181
Species
UBA1181 sp900769555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.