Cluster: MGYG000003543.1_CGC7
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003543.1
- CGC Family ID: CGCFAM_07387
- Continent: Oceania
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003543.1_110 | MGYG000003543.1_110_7 | 6136 | 7572 | + | 9.A.25.1.1 |
| pfam | MGYG000003543.1_110 | MGYG000003543.1_110_8 | 7602 | 8381 | + | GldL_N |
| TC | MGYG000003543.1_110 | MGYG000003543.1_110_9 | 8408 | 9979 | + | 9.A.25.1.1 |
| pfam | MGYG000003543.1_110 | MGYG000003543.1_110_10 | 10003 | 11106 | + | GldN |
| pfam | MGYG000003543.1_110 | MGYG000003543.1_110_11 | 11220 | 11840 | + | OMP_b-brl | OMP_b-brl_2 |
| TC | MGYG000003543.1_110 | MGYG000003543.1_110_12 | 11897 | 13084 | + | 1.A.23.4.5 |
| NULL(UNKNOWN) | MGYG000003543.1_110 | MGYG000003543.1_110_13 | 13123 | 13440 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003543.1_110 | MGYG000003543.1_110_14 | 13550 | 15796 | + | 3.A.11.3.1 |
| pfam | MGYG000003543.1_110 | MGYG000003543.1_110_15 | 15955 | 19683 | + | TMEM260-like |
| CAZyme | MGYG000003543.1_110 | MGYG000003543.1_110_16 | 19697 | 20308 | + | CE4 |
| pfam | MGYG000003543.1_110 | MGYG000003543.1_110_17 | 20308 | 21231 | + | QueG_DUF1730 | Fer4_16 |
| TC | MGYG000003543.1_110 | MGYG000003543.1_110_18 | 21343 | 22911 | + | 3.D.10.1.4 |
| pfam | MGYG000003543.1_110 | MGYG000003543.1_110_19 | 23160 | 24683 | + | AICARFT_IMPCHas | MGS |
| TC | MGYG000003543.1_110 | MGYG000003543.1_110_20 | 24704 | 25720 | + | 1.A.33.1.5 |
Gene ID: MGYG000003543.1_110_7
Type: TC
Location: 6136 - 7572 (+)
Type: TC
Location: 6136 - 7572 (+)
Gene ID: MGYG000003543.1_110_8
Type: pfam
Location: 7602 - 8381 (+)
Type: pfam
Location: 7602 - 8381 (+)
Gene ID: MGYG000003543.1_110_9
Type: TC
Location: 8408 - 9979 (+)
Type: TC
Location: 8408 - 9979 (+)
Gene ID: MGYG000003543.1_110_10
Type: pfam
Location: 10003 - 11106 (+)
Type: pfam
Location: 10003 - 11106 (+)
Gene ID: MGYG000003543.1_110_11
Type: pfam
Location: 11220 - 11840 (+)
Type: pfam
Location: 11220 - 11840 (+)
Gene ID: MGYG000003543.1_110_12
Type: TC
Location: 11897 - 13084 (+)
Type: TC
Location: 11897 - 13084 (+)
Gene ID: MGYG000003543.1_110_13
Type:
Location: 13123 - 13440 (-)
Type:
Location: 13123 - 13440 (-)
Gene ID: MGYG000003543.1_110_14
Type: TC
Location: 13550 - 15796 (+)
Type: TC
Location: 13550 - 15796 (+)
Gene ID: MGYG000003543.1_110_15
Type: pfam
Location: 15955 - 19683 (+)
Type: pfam
Location: 15955 - 19683 (+)
Gene ID: MGYG000003543.1_110_16
Type: CAZyme
Location: 19697 - 20308 (+)
Type: CAZyme
Location: 19697 - 20308 (+)
Gene ID: MGYG000003543.1_110_17
Type: pfam
Location: 20308 - 21231 (+)
Type: pfam
Location: 20308 - 21231 (+)
Gene ID: MGYG000003543.1_110_18
Type: TC
Location: 21343 - 22911 (+)
Type: TC
Location: 21343 - 22911 (+)
Gene ID: MGYG000003543.1_110_19
Type: pfam
Location: 23160 - 24683 (+)
Type: pfam
Location: 23160 - 24683 (+)
Gene ID: MGYG000003543.1_110_20
Type: TC
Location: 24704 - 25720 (+)
Type: TC
Location: 24704 - 25720 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
HGM04593
Species
HGM04593 sp900769465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.