dbCAN HGM

Cluster: MGYG000003543.1_CGC33

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	MGYG000003543.1_335	MGYG000003543.1_335_3	3641	4444	+	GT2
pfam	MGYG000003543.1_335	MGYG000003543.1_335_4	4454	4753	-	DUF4491
CAZyme	MGYG000003543.1_335	MGYG000003543.1_335_5	4843	9108	-	GH2
CAZyme	MGYG000003543.1_335	MGYG000003543.1_335_6	9237	10553	+	GH29
TC	MGYG000003543.1_335	MGYG000003543.1_335_7	10582	11319	+	9.B.158.1.1
STP	MGYG000003543.1_335	MGYG000003543.1_335_8	11401	11970	+	Pribosyltran
TC	MGYG000003543.1_335	MGYG000003543.1_335_9	11982	13265	-	2.A.119.1.2
pfam	MGYG000003543.1_335	MGYG000003543.1_335_10	13345	15981	-	Transglut_core
TC	MGYG000003543.1_335	MGYG000003543.1_335_11	16207	17883	+	3.A.1.112.9
pfam	MGYG000003543.1_335	MGYG000003543.1_335_12	17973	18566	+	RuvA_N \| RuvA_C \| HHH_5
TC	MGYG000003543.1_335	MGYG000003543.1_335_13	18574	25953	+	9.A.25.1.1

Gene ID: MGYG000003543.1_335_3
Type: CAZyme
Location: 3641 - 4444 (+)

Gene ID: MGYG000003543.1_335_4
Type: pfam
Location: 4454 - 4753 (-)

Gene ID: MGYG000003543.1_335_5
Type: CAZyme
Location: 4843 - 9108 (-)

Gene ID: MGYG000003543.1_335_6
Type: CAZyme
Location: 9237 - 10553 (+)

Gene ID: MGYG000003543.1_335_7
Type: TC
Location: 10582 - 11319 (+)

Gene ID: MGYG000003543.1_335_8
Type: STP
Location: 11401 - 11970 (+)

Gene ID: MGYG000003543.1_335_9
Type: TC
Location: 11982 - 13265 (-)

Gene ID: MGYG000003543.1_335_10
Type: pfam
Location: 13345 - 15981 (-)

Gene ID: MGYG000003543.1_335_11
Type: TC
Location: 16207 - 17883 (+)

Gene ID: MGYG000003543.1_335_12
Type: pfam
Location: 17973 - 18566 (+)

Gene ID: MGYG000003543.1_335_13
Type: TC
Location: 18574 - 25953 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.